chore: bump deps (#14065)

<!-- This is an auto-generated comment: release notes by coderabbit.ai
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## Summary by CodeRabbit

* **Chores**
* Updated dependency versions across the monorepo (notably zod →
^3.25.76 and vitest-related packages → ^3.2.4), plus minor package bumps
to align tooling and libraries. These are manifest/test-tooling updates
only; no public API, behavior, or end-user features were changed.

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packages/frontend/component/package.json

@@ -68,7 +68,7 @@
     "react-transition-state": "^2.2.0",
     "sonner": "^2.0.0",
     "swr": "^2.2.5",
-    "zod": "^3.24.1"
+    "zod": "^3.25.76"
   },
   "devDependencies": {
     "@affine-tools/utils": "workspace:*",
@@ -86,7 +86,7 @@
     "typescript": "^5.7.2",
     "unplugin-swc": "^1.5.1",
     "vite": "^7.0.0",
-    "vitest": "3.1.3"
+    "vitest": "^3.2.4"
   },
   "version": "0.25.7"
 }